cyto_dl.image.transforms.project module#

class cyto_dl.image.transforms.project.Projectd(keys: list | str, projection_dim: int = 1, projection_type: str = 'max', allow_missing_keys: bool = False)[source]#

Bases: Transform

Monai-style transform to apply projections (e.g., max, std) to an image.

Parameters:

  • keys (Union[list, str]) – keys to apply projection

  • projection_dim (int=1) – index into C[Z]YX to compute projection across

  • projection_type (str=”max”) – Type of projection to apply. Options: “max”, “min”, “std”, “median”, “mode”, “mean”

  • allow_missing_keys (bool=False) – Whether to raise error if specified key is missing