cyto_dl.api.data module

class cyto_dl.api.data.AutoThresholdMethod(value)

Bases: Enum

An enumeration.

ISODATA = 'threshold_isodata'

LI = 'threshold_li'

LOCAL = 'threshold_local'

MEAN = 'threshold_mean'

MINIMUM = 'threshold_minimum'

MULTIOTSU = 'threshold_multiotsu'

NIBLACK = 'threshold_niblack'

OTSU = 'threshold_otsu'

SAUVOLA = 'threshold_sauvola'

TRIANGLE = 'threshold_triangle'

YEN = 'threshold_yen'

class cyto_dl.api.data.ExperimentType(value)

Bases: Enum

An enumeration.

GAN = 'gan'

INSTANCE_SEG = 'instance_seg'

LABEL_FREE = 'labelfree'

SEGMENTATION = 'segmentation'

SEGMENTATION_ARRAY = 'segmentation_array'

SEGMENTATION_PLUGIN = 'segmentation_plugin'

class cyto_dl.api.data.HardwareType(value)

Bases: Enum

An enumeration.

CPU = 'cpu'

GPU = 'gpu'

class cyto_dl.api.data.PatchSize(value)

Bases: Enum

Patch size for training, and their respective patch shapes.

LARGE = [16, 128, 128]

MEDIUM = [16, 64, 64]

SMALL = [16, 32, 32]