AICSImageIO
4.14.0

Contents:

  • Overview
  • Installation
    • Stable release
    • From sources
  • Full API Reference
    • aicsimageio package
      • Subpackages
        • aicsimageio.metadata package
        • aicsimageio.readers package
        • aicsimageio.utils package
        • aicsimageio.writers package
      • Submodules
      • aicsimageio.aics_image module
        • AICSImage
        • imread()
        • imread_dask()
        • imread_xarray()
        • imread_xarray_dask()
      • aicsimageio.constants module
      • aicsimageio.dimensions module
        • DimensionNames
        • Dimensions
      • aicsimageio.exceptions module
        • ConflictingArgumentsError
        • InvalidDimensionOrderingError
        • UnexpectedShapeError
        • UnsupportedFileFormatError
      • aicsimageio.formats module
      • aicsimageio.image_container module
        • ImageContainer
      • aicsimageio.transforms module
        • generate_stack()
        • reduce_to_slice()
        • reshape_data()
        • transpose_to_dims()
      • aicsimageio.types module
        • PhysicalPixelSizes
      • Module contents
        • get_module_version()
  • Developer Resources
    • Benchmarks
    • Contributing
      • Get Started!
      • Updating the Submodule
      • Adding a New Custom Reader
        • Basics
        • Reader Class Implementation
        • Custom Dependencies
        • Testing
        • Optional Reader Benchmarking
        • Documentation
      • Benchmarking
      • Deploying
    • Code of Conduct
      • Our Pledge
      • Our Standards
      • Our Responsibilities
      • Scope
      • Enforcement
      • Attribution
    • Governance Model
      • Abstract
      • Roles And Responsibilities
        • The Community
        • Contributors
        • Core developers
        • Steering Council
      • Decision Making Process
    • Mission and Values
      • Mission
      • Values
      • Acknowledgments
    • Roadmap
      • For 4.* Series of Releases - September 2020
      • Enable Reading and Writing to Remote Sources Quick and Easy
      • Make Writing n-dimensional Images with Partial or Complete Metadata Simple
      • Make Converting and Accessing Metadata as Easy as Possible with a Standard API
      • Expand the List of Currently Available Proprietary File Format Readers
      • About This Document
  • Changelog
    • (unreleased)
    • v4.14.0 (2023-10-30)
      • Fix
      • Other
    • v4.13.0 (2023-10-30)
      • New
      • Other
    • v4.12.1 (2023-08-16)
      • New
      • Fix
      • Other
    • v4.12.0 (2023-08-03)
      • New
      • Other
    • v4.11.0 (2023-05-05)
      • Fix
      • Other
    • v4.10.0 (2023-04-11)
      • New
      • Fix
      • Other
    • v4.9.4 (2022-12-06)
      • Fix
    • v4.9.3 (2022-11-15)
      • Fix
      • Other
    • v4.9.2 (2022-08-24)
      • New
      • Fix
      • Other
    • v4.9.1 (2022-08-02)
      • Fix
      • Other
    • v4.9.0 (2022-07-19)
      • New
      • Other
    • v4.8.0 (2022-05-26)
      • New
      • Fix
      • Other
    • v4.7.0 (2022-04-19)
      • New
      • Other
    • v4.6.4 (2022-03-18)
      • Fix
    • v4.6.3 (2022-03-03)
      • Fix
    • v4.6.2 (2022-03-01)
    • v4.6.1 (2022-03-01)
      • Fix
    • v4.6.0 (2022-02-22)
      • Fix
      • Other
    • v4.5.2 (2021-12-16)
    • v4.5.1 (2021-12-08)
      • New
      • Fix
      • Other
    • v4.5.0 (2021-11-04)
      • New
      • Other
    • v4.4.0 (2021-10-12)
      • New
    • v4.3.0 (2021-10-08)
      • New
      • Other
    • v4.2.0 (2021-09-27)
      • New
      • Fix
      • Other
    • v4.1.0 (2021-08-10)
      • New
      • Fix
      • Other
    • v4.0.5 (2021-07-15)
      • Fix
      • Other
    • v4.0.4 (2021-07-12)
      • New
      • Other
    • v4.0.3 (2021-07-05)
      • Fix
      • Other
    • v4.0.2 (2021-06-22)
      • Fix
      • Other
    • v4.0.1 (2021-06-08)
      • Fix
    • v4.0.0 (2021-06-07)
      • New
      • Fix
      • Other
    • v3.3.5 (2021-01-25)
      • Fix
    • v3.3.4 (2021-01-13)
    • v3.3.3 (2020-12-14)
      • Fix
      • Other
    • v3.3.2 (2020-11-17)
    • v3.3.1 (2020-09-23)
      • Fix
      • Other
    • v3.3.0 (2020-09-09)
      • New
    • v3.2.3 (2020-06-23)
      • New
    • v3.2.2 (2020-06-11)
      • New
      • Other
    • v3.2.1 (2020-05-26)
      • Fix
    • v3.2.0 (2020-05-13)
      • New
      • Fix
      • Other
    • v3.1.4 (2020-03-21)
      • New
      • Fix
    • v3.1.3 (2020-03-11)
      • Fix
      • Other
    • v3.1.2 (2020-03-06)
      • New
      • Other
    • v3.1.1 (2020-02-21)
      • Fix
      • Other
    • v3.1.0 (2020-02-03)
      • New
      • Fix
    • v3.0.7 (2019-11-05)
    • v3.0.6 (2019-10-31)
      • New
      • Fix
    • v3.0.5 (2019-10-30)
    • v3.0.4 (2019-10-28)
    • v3.0.3 (2019-10-25)
      • Fix
      • Other
    • v3.0.2 (2019-10-11)
    • v3.0.1 (2019-10-04)

Important Classes:

  • aicsimageio.aics_image.AICSImage
    • AICSImage
      • AICSImage.__init__()
  • aicsimageio.readers.reader.Reader
    • Reader
      • Reader.__init__()
  • aicsimageio.readers.ome_tiff_reader.OmeTiffReader
    • OmeTiffReader
      • OmeTiffReader.__init__()
  • aicsimageio.readers.tiff_reader.TiffReader
    • TiffReader
      • TiffReader.__init__()
  • aicsimageio.writers.ome_tiff_writer.OmeTiffWriter
    • OmeTiffWriter
      • OmeTiffWriter.__init__()
AICSImageIO
  • Python Module Index

Python Module Index

a
 
a
- aicsimageio
    aicsimageio.aics_image
    aicsimageio.constants
    aicsimageio.dimensions
    aicsimageio.exceptions
    aicsimageio.formats
    aicsimageio.image_container
    aicsimageio.metadata
    aicsimageio.metadata.utils
    aicsimageio.readers
    aicsimageio.readers.array_like_reader
    aicsimageio.readers.bfio_reader
    aicsimageio.readers.bioformats_reader
    aicsimageio.readers.czi_reader
    aicsimageio.readers.default_reader
    aicsimageio.readers.dv_reader
    aicsimageio.readers.lif_reader
    aicsimageio.readers.nd2_reader
    aicsimageio.readers.ome_tiff_reader
    aicsimageio.readers.ome_zarr_reader
    aicsimageio.readers.reader
    aicsimageio.readers.sldy_reader
    aicsimageio.readers.sldy_reader.sldy_image
    aicsimageio.readers.tiff_glob_reader
    aicsimageio.readers.tiff_reader
    aicsimageio.transforms
    aicsimageio.types
    aicsimageio.utils
    aicsimageio.utils.io_utils
    aicsimageio.writers
    aicsimageio.writers.ome_tiff_writer
    aicsimageio.writers.ome_zarr_writer
    aicsimageio.writers.timeseries_writer
    aicsimageio.writers.two_d_writer
    aicsimageio.writers.writer

© Copyright 2022, Eva Maxfield Brown, Allen Institute for Cell Science.

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