timelapse_tools.utils package

Submodules

timelapse_tools.utils.czi_metadata module

timelapse_tools.utils.czi_metadata.channel_names(czi)[source]

Metadata specified channel names

timelapse_tools.utils.czi_metadata.created_by(czi)[source]

User of record

timelapse_tools.utils.czi_metadata.datetime_created(czi)[source]

Date created as indicated by czi metadata

timelapse_tools.utils.czi_metadata.time_per_frame(czi)[source]

Waiting on subblock metadata

timelapse_tools.utils.czi_metadata.total_duration(czi)[source]

Waiting on subblock metadata

timelapse_tools.utils.czi_reading module

timelapse_tools.utils.czi_reading.daread(img: Union[str, pathlib.Path]) → dask.array.core.Array[source]

Read a CZI image file as a delayed dask array where each YX plane will be read on request.

Parameters

img (Union[str, Path]) – The filepath to read.

Returns

img – The constructed dask array where each YX plane is a delayed read.

Return type

dask.array.core.Array

timelapse_tools.utils.file_summary module

timelapse_tools.utils.file_summary.file_size(fn)[source]

Get human readable size of a file.

Module contents

Utils package for timelapse_tools.